[Freesurfer] Re: Freesurfer output. Segmentation fault (core dumped) during parcellation step

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This posting indicates that changing the path to ./stats from ../stats got rid of a segmentation fault.  I would at least check that all paths in the arguments ro mris_anatomical_stats are correct though. https://secure-web.cisco.com/17sKLSeDVET5-5S3ZEgRGL6lX55gFUMqV2UWISNObj-rC9p... But I don’t see the error in the recon -all log you sent which is apparently from May 2020 showing Freesurfer 6.0.0 is being run on RedHat Enterprise Linux 7.5. - R. On Jul 10, 2025, at 16:24, Samantha Hendry <shendry2@ed.ac.uk> wrote:mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab FMS_0094 lh white