Hi,
Thanks for your reply. I have sought advice from someone who is experienced in Homer2 atlas viewer.
Is it possible to find out the the coordinate system of the T1.mgz file and the surface file created by FreeSurfer?
Thanks!
On Fri, Feb 26, 2016 at 3:36 PM, dgw dgwakeman@gmail.com wrote:
Maheen,
it sounds like a question that could be better answered by the Homer2 list.
hth d
On Fri, Feb 26, 2016 at 8:13 AM, Maheen Siddiqui maheen.siddiqui91@gmail.com wrote:
Dear FreeSurfer Users,
I have a head surface mesh and a pial surface mesh obtained after segmentation of a T1 MRI scan. I am going to importing these into Homer2 Atlas Viewer as subject anatomy.
However before I can do this import successfully, I need to bring the two meshes into the same coordinate system. At the moment they are in
different
coordinate systems (as pictured) and I need to bring the pial surface
mesh
into the head surface mesh. I am a little unsure how to do this.
Does anybody have any experience with this? Or any advice on what I
could do
possibly?
Thanks,
Maheen
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