Hi Joel,
recon-all -make all -s <subjid> should work if you are using the latest version. Otherwise you can check which steps were run in the /scripts/recon-all-status.log and rerun them with their individual flags, as listed here: https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable
Jenni
On Tue, Apr 8, 2008 at 5:04 PM, joel bruss joel-bruss@uiowa.edu wrote:
Hello-
I was running recon-all when my machine croaked. I was on the latter-half of day two and I think (hope) that the process was nearing completion. Is there a command to give to FreeSurfer to start back in the pipeline where the process left off or do I have to do each command separately? Specifically, this was the command I used:
recon-all -subjid sub1 -all
Is there a flag or comment to check/pick up where I left off or am I out of luck?
Thanks for your help.
-Joel
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