HI Francesco,
The latest development version of freeview can do this. You can download it from here:
https://surfer.nmr.mgh.harvard.edu/fswiki/UpdateFreeview https://surfer.nmr.mgh.harvard.edu/fswiki/UpdateFreeview
Best, Ruopeng
On Jan 21, 2019, at 8:54 AM, Francesco Puccettone francesco.puccettone@gmail.com wrote:
External Email - Use CautionDear all,
I would like to show several structures from the DKT (or the Desikan-Killiany) atlas alone on a "blank" fsaverage brain, rather than have all structures displayed in different colors (as happens by default). For instance, I'd like to just show "medialorbitofrontal" on its own, then "middletemporal" on its own, etc.
After I open the parcellation, freeview -v /FS/fsaverage/mri/aparc+aseg.mgz:colormap=lut:opacity=0.4 -f /FS/fsaverage/surf/lh.white:annot=aparc.annot , I expected to be able to turn each label in the list on and off like a layer, but this does not work. <21-01-2019 14.48.54.jpg>
I hoped I could use Alt+F to hide/show each atlas label at a time (cf freeview tutorial https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/OutputData_freeview), but this instead toggles the entire external surface of the brain on and off.
Can anyone help? Thank you! --Francesco _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer