Re: [Freesurfer] mri_surf2surf source and target annot formats

Currently, yes. If this is a burden for you, I could hack something. There might be other ways such as converting the annot into a segmentation (mris_annotation2label), passing that to surf2surf with --sval (and --mapmethod nnf), then converting the output back to an annotation (mris_seg2annot). This is what happens internally. doug

On 05/25/2012 09:52 AM, Satrajit Ghosh wrote:

hi doug,

we are trying to figure out if for annot we *have to* use sval-annot or if there is a way to do it with sval?

cheers,

satra

On Fri, May 25, 2012 at 9:46 AM, Douglas Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:

If the source is an annot, then you need to use --sval-annot Is
this causing a problem?
doug

On 5/24/12 6:48 PM, Arno Klein wrote:

...

hello!

in mri_surf2surf, does anyone know how to specify the source and
target formats if --sval is annot without using --sval-annot, as
in "--sfmt" or "--tfmt"?

cheers,
@rno



_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu  <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer


The information in this e-mail is intended only for the person to
whom it is
addressed. If you believe this e-mail was sent to you in error and
the e-mail
contains patient information, please contact the Partners
Compliance HelpLine at
http://www.partners.org/complianceline . If the e-mail was sent to
you in error
but does not contain patient information, please contact the
sender and properly
dispose of the e-mail.

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer