Hello Bruce,
I am referring to link
http://surfer.nmr.mgh.harvard.edu/fswiki/VolumeRoiCorticalThickness
to calculate the cortical thickness of particular area such as Left hippocampus for our own data set.
But i am looking for forward to generate lh.thickness file in freesurfer for own data set which can be used as overlay. (Used for surface to surface overlay)
Can u suggest how to generate lh.thickness file for my own data using freesurfer...?
Thanks in advanced.
cheers Saurabh Thakur,
On Tue, Mar 11, 2014 at 10:28 PM, Bruce Fischl fischl@nmr.mgh.harvard.eduwrote:
try configure->functional overlay or something like that after loading the thickness into a functional overlay
On Tue, 11 Mar 2014, Saurabh Thakur wrote:
I am referring one paper.
It mentioned about the freesurfer and cortical thickness they hv got in tksurfer.
I m just want to know how to get that done in tksurfer.
I hv attached that paper for the reference.
cheers Saurabh Thakur,
On Tue, Mar 11, 2014 at 7:14 AM, Bruce Fischl <fischl@nmr.mgh.harvard.edu
wrote: what is it that you want to histogram? If the thickness, tksurfer will do this for you if you load it as an overlay. Or you can read it into matlab and show it there
On Tue, 11 Mar 2014, Saurabh Thakur wrote: > Hello Freesurfer Expert, > > Can anyone help me with histogram plotting of different surfaces in > tksurfer. > > I looking to calculate the thickness of cortex. > > Thanks in advance, > > > Saurabh Thakur, > > > > > >
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