Hello All, As recently as September we were downloading our fMRI scanning data from Bourget by setting the following freesurfer environment: source /usr/local/freesurfer/nmr-stable51-env
and then unpacking and converting the data to Nifti format using the "unpacksdcmdir" commands: unpackscdcmdir -src "path to subject data" -targ "subject name" -scanonly "subjectname"out
creating a config file, and then:
unpacksdcmdir -src "path to subject data" -targ "subject name" -cfg "subjectname"config
But unpackscdcmdir does not work any longer? We get the message that the command is not found.
Is there a new command that must be used to perform these sorts of functions? I tried dcmunpack and it wasn't recognized either (although I may not have been using that command correctly).
Thank you for any help! Sincerely, Thackery Stern Laboratory at Boston University