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Dear TRACULA experts, As you can see in the figure attached to this email, there are 3 tracts that were not able to be properly reconstructed (right fornix and left and right corticospinal tract). What I have tried: 1) Setting reinit=1 in the configuration file and re-run TRACULA; 2) Changing the number of control points for each tract, according to the pathlist.txt (even though the second column refers to the default control points, I am not sure what the first column means);
My idea now would be to edit the control points manually but I don't know which file contains those points. I am assuming that each tract must have a file with the respective control points. This process is described in this article https://secure-web.cisco.com/1Syob_RQa8CnqTu5J98-5wBZC9rpcTVD0Wgicm76PjaNZvunNKORO9lKXyClNN0Y2WxCk6EfBGpmjpvQhMNdNL4HNdABZ6PI_Tq1XmtzoAvtObahEbHUl2NZKayD-pIREzpMf9Dq59bK3uYdj-Xf__rEfBPaDyj4xaBAvdz4nl7070jSkDPdQpBQDgTFinlGxiHA0o5QDsYzhZxtlIjNwLHWmvnI4njf9itNg52sR5YuhDtkBZ9HFgMfDIw2nOQLxGvA-Ba2WmZyep-JDHCZ1jBr7slifsr90Dum5xqAzGWupBZyotJI-9NkkQ9TBEUl1lxUjp-vNAI3O6CzOWjFGjg/https%3A%2F%2Fpmc.ncbi.nlm.nih.gov%2Farticles%2FPMC8006796%2Fpdf%2Fnihms-1680886.pdf. I am looking for something such as Figure 2 and 3 in that article.
I have looked into the email archive and didn't find anything related to this problem.
Best wishes, Mariana
