External Email - Use Caution
Dear Sir or Madam,
I've just installed the last version of FreeSurfer for Linux ( freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.0/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz), but I got some troubles testing it:
When trying to follow Example 2 ( https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall#Download), I get a "syntax error message":
lise.aujoulat@ICM-COHEN-LF001 ~ $ *export SUBJECTS_DIR=/home/lise.aujoulat/Bureau/SUBJECTS_DATA* lise.aujoulat@ICM-COHEN-LF001 ~ $
* bash recon-all -i sample-001.nii.gz -s bert -all/usr/local/freesurfer/bin/recon-all: recon-all: ligne 31: erreur de syntaxe près du symbole inattendu « ( »/usr/local/freesurfer/bin/recon-all: recon-all: ligne 31: `set inputargs = ($argv);'*
You can find a screen shot attached to this email. It seems that no one encountered this problem so far.
I had installed the macOS version some months ago on my personal computer and encountered no problem at that time.
How could I fix this?
Thanks for your help,
Lise
