Re: [Freesurfer] mris_fix_topology

It was not mris_fix_topology that failed but mris_euler_number (but that might have failed because of something in the topology fix). What happens if you:

cd /home/falk/freesurfer/subjects/yv98_05mm_div mris_euler_number ../surf/rh.orig

doug

Falk Lüsebrink wrote:

Hi FreeSurfers,

Attached is a log file containing an error of mris_fix_topology and I would like to know how to fix that issue if that is possible. Is it possible to view a defect (in that case #33) in tksurfer or freeview to identify a possible error in the wm.mgz or filled.mgz to correct it manually?

Thanks in advance,

Falk

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