both of what? Sorry, it looks like the thread was garbled below or somehow the digest got into it. Try responding to the email that I sent to keep things in order
On 05/09/2014 05:09 PM, Sherryse Corrow wrote:
Thanks Douglas. Yes, both of those exist.
-- Sherryse Corrow, Ph.D. / Postdotoral Fellow Human Vision and Eye Movement Lab Department of Ophthalmology & Visual Sciences UBC/VGH Eye Care Centre 360A-2550 Willow Street Vancouver, BC, V5Z 3N9 Tel: 604-875-4111 ext 67672
Cell: 604-315-6717
sherryse.corrow@eyecarecentre.org
On 5/7/14, 6:54 P, "freesurfer-request@nmr.mgh.harvard.edu" freesurfer-request@nmr.mgh.harvard.du wrote:
Send Freesurfer mailing list submissions to freesurfer@nmr.mgh.harvard.edu
To subscribe or unsubscribe via the World Wide Web, visit https://mail.nmr.mghharvard.edu/mailman/listinfo/freesurfer or, via email, send a message with subject or body 'help' to freesurfer-request@nmr.mgh.harvard.edu
You can reach the person managing the list at freesurfer-owner@nmr.mgh.harvard.edu
When replying, please edit your Subject line so it is more specific than "Re: Contents of Freesurfer digest..."
Today's Topics:
- Re: Viewing functional data on the inflated brain (Sherryse Corrow)
- Re: vertex-wise cortical thickness and whole brain labeling (Douglas N Greve)
- Re: Question about Qdec p-values (Douglas N Greve)
- Re: Quesion about lobar volumes (Douglas N Greve)
- Re: Viewing functional data on the inflated brain (Douglas N Greve)
- Re: vertex-wie cortical thickness and whole brain labeling (Bruce Fischl)
- Re: aseg.stats volume mismatch (Gabor Perlaki)
- Re: aseg.stats volume mismatch (Bruce Fischl)
- Covert processed RS time series to MNI152 (Paul Beach)
- Re: Quesion about lobar volume (pfotiad@nmr.mgh.harvard.edu)
- Re: Quesion about lobar volumes (Douglas N Greve)
- Re: Quesion about lobar volumes (pfotiad@nmr.mgh.harvard.edu)
- Re: LOOK FOR HELP! (???)
Message: 1 Date: Wed, 7 May 2014 10:59:55 -0700 From: Sheryse Corrow sherryse.corrow@eyecarecentre.org Subject: Re: [Freesurfer] Viewing functional data on the inflated brain To: "freesurfer@nmr.mgh.harvard.edu" freesurfer@nmr.mgh.harvard.edu>Message-ID: CF8FC0ED.AE9A%sherryse.corrow@eyecarecentre.org Content-Type: text/plain; charset="windows-1252"
Tanks Douglas. We tried that . . . The registration matrix that we need is not created. Here is the output log file (attache). I am a bit new to this so I am hoping it has the information you need. After taking a quick glance at the log file, we noticed there are errors in the log file.
Step by step, this is what we did after we an recon-all: Reg-feat2anat ?feat OurFeatDirectory.feat ?subject P209
When we open the folder experiment.feat/reg/freesurfer, there is no anat2exf.register.dat file. However, there is a file called: anat2exf.register.dat.init.
Thanks, Sherryse -- Sherryse Corrow, Ph.D. / Postdoctoral Fellow Human Vision and Eye Movement Lab Department of Ophthalmoogy & Visual Sciences UBC/VGH Eye Care Centre 360A-2550 Willow Street Vancouver, BC, V5Z 3N9 Tel: 604-875-4111 ext 67672
Cell: 604-315-6717
sherryse.corrow@eyecarecentre.org
On 5/6/14, 9:00 AM, "freesurfer-request@nmr.mgh.harvard.edu" freesurfer-request@nmr.mgh.harvard.edu wrote:
Re: Viewing functional data on the inflated brain