Hi Jürgen - There is no bvecslist option. Currently there is no support for multiple bvecs files in one configuration file but it's certainly something that can be added to the next release. For now you'd have to change the configuration file accordingly for each subject with a different bvecs file.
Or I could make the change now and send you a patched version of the trac-* scripts, since it's something potentially useful to a lot of people and not major :)
a.y
On Thu, 21 Jul 2011, Jürgen Hänggi wrote:
Dear FS and Tracula experts
Because of correction for slice angulation during scanning, I have as many bvecs files as subjects. Therefore I created a list for the bvecs
set bvecslist = (b101/bvecs b102/bvecs) but tracula reports the following error:
mv: rename /Users/juergenhaenggi/Desktop/Tracula/Results/b101/dmri/dwi_orig_flip.mghdti .bvecs to /Users/juergenhaenggi/Desktop/Tracula/Results/b101/dmri/bvecs: No such file or directory
However, when using set bvecsfile, everthing works fine.
Any idea how to deal with more than one bvecs file?
Thanks in advance Regards Jürgen
Jürgen Hänggi, Ph.D. Division Neuropsychology Institute of Psychology University of Zurich Binzmuehlestrasse 14, PO Box 25 8050 Zurich, Switzerland 0041 44 635 73 97 (phone office) 0041 76 445 86 84 (phone mobile) 0041 44 635 74 09 (fax office) BIN 4.D.04 (office room number) j.haenggi[at]psychologie.uzh.ch (email) http://www.psychologie.uzh.ch/neuropsy/ (website) http://www.juergenhaenggi.ch (private website)
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