Hi Daniele, do you think you could send us the subject? norm.mgz, wmparc.mgz and aseg.mgz should be enough. Also, have you experienced this problem with other subjects? Cheers, Eugenio
Juan Eugenio Iglesias Postdoctoral researcher BCBL www.jeiglesias.com www.bcbl.eu
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From: "Daniele Orlandi" daniele.orlandi.psy@gmail.com To: "Freesurfer support list" freesurfer@nmr.mgh.harvard.edu Sent: Wednesday, November 18, 2015 10:20:10 AM Subject: [Freesurfer] -hippocampal-subfields-T1
dear all, I'm running analysis with the new FS-v6.0 using the flag -hippocampal-subfields-T1 and I get the following error:
none Matrix: -3.00003 0 0 0 0 -3.00003 0 3.00003 0 Offset: [-34.0783, 128.423, -71.9905] Center: [0, 0, 0] Translation: [-34.0783, 128.423, -71.9905] Inverse: -0.33333 0 0 0 0 0.33333 0 -0.33333 0 Singular: 0 I am WriteImage and I'm running! Wrote image to file asmr2.mgz This file does not contain MRI parameters Error using zeros NaN and Inf not allowed.
Error in segmentSubjectT1_autoEstimateAlveusML (line 1396)
MATLAB:nonaninf
How I can solve it?
Best, Daniele
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