What was the error message?
Peace,
Matt.
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of John Anderson j.anderson@publicist.com Reply-To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: Sunday, June 11, 2017 at 9:06 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] difference in T1 and T2 resolution
Dear Freesurfer experts, I have T1 and T2 images were unfortunately acquired with different resolution (i.e the voxel sizes is not the same) T1 is 280X280X208 T2 is 270X270X200
I tried to run "recon-all" but it failed to process the data. The command that I used is : pbsubmit -c " recon-all -subjid subj1 -T2 PATH_TO_/T2.nii.gz -qcache -T2pial -all"
How can I analyze these images? Is it a correct procedure to conform the voxels using "mri_convert". Is this procedure correct? does it hurt the anatomy of the images?
I highly appreciate your help John _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.