I have T1volume+org.BRIK - should I use those with mri_convert?
Thanks again,
Jesse
On Tue, Nov 24, 2009 at 4:23 PM, Saad, Ziad S. (NIH/NIMH) [E] < saadz@mail.nih.gov> wrote:
mri_convert usually work with BRIK files.
Alternately, 3dAFNItoNIFTI could turn BRIK files to nifti format which FreeSurfer can read fine.
cheers, ziad
On Nov 24, 2009, at 3:28 PM, Bruce Fischl wrote:
These are not the standard .BRIK files? Ziad (ccd) will know.
Bruce
On Tue, 24 Nov 2009, Jesse Bledsoe wrote:
Hello,
So far I have had no problems running recon-all with .mnc files but could use some guidance converting/reconstructing brains processed with AFNI (MRDC).
There are 120 MRDC files in the T1 directory.
I believe I need to run mri_convert on these MRDC files but am unsure of what the correct command would be?
Thanks in advance,
Jesse