Re: [Freesurfer] How to re-run recon-all

Hi Aldo

You should be able to use recon-all -make all ... to run anything that did not complete. You might have to specify the -no-isrunning (or something like that) flag if it didn't terminate cleanly

Cheers Bruce

From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Camargo, Aldo Sent: Friday, August 28, 2020 3:11 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] How to re-run recon-all

External Email - Use Caution Hi Freeserufer experts:

By mistake I cancel the recon-all when it was about 3 hours of processing. There is a way to re-run the recon-all and that continues where it was stopped ?

Thanks a lot,

Aldo