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Hi Andrew,
I can't answer if wm-hypointensity is supported in recon-all-clinical. I'm assuming that you obtained aseg.stats by running mri_segstats. How does your command look like?
Best,
Yujing
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of Andrew Dedinas Geoly Sent: Tuesday, July 18, 2023 11:44 AM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] WM Hypointensities
External Email - Use Caution Hi Freesurfer experts!
I am hoping to extract the wm-hypointensity data from some recon-all-clinical runs. I was able to extract aseg.stats information correctly but noticed there was no information regarding the wm-hypointensities.
Is this supported by recon-all-clinical?
Best, Andrew
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Andrew D. Geoly, MS
Research Data Analyst 1
Brain Stimulation Lab
Department of Psychiatry and Behavioral Sciences
Stanford University School of Medicine