Yes, same command
On 4/17/2022 10:24 PM, Alexopoulos, Dimitrios wrote:
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Can someone confirm?
Thx.
Jim
*From:* freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu *On Behalf Of *Alexopoulos, Dimitrios *Sent:* Tuesday, April 12, 2022 3:24 PM *To:* Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] rerunning on 7.2 with edited brainmask using hi-res
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We are running some hi-res 0.8mm3 isotropic data through FS 7.2 using the following command.
*recon-all -s subj -all –hires*
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We are adding back brain which has been removed by the masking process by cloning the T1/brainmask images in freeview and adding back voxels.
A revised brainmask.mgz is saved.
Can/should the same command be used to rerun using hi-res data?
Jim
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