Dear all,
I am currently trying to automatically generate Freesurfer screenshots and, to this purpose, I need to change the color scale of the surface overlay to "Color Wheel - Inverse" and with specific min and max threshold.
Looking for a way to achieve this, I found this thread with similar request, but unfortunately no solution was posted. Thus Heath (who kindly replied to my email) suggested to re-post the question to the entire FreeSurfer community.
So far I am able only to set the min max threshold with the following command:
freeview -f $SUBJECTS_DIR/subj01/surf/lh.inflated:overlay=/pathToOverlay/MyOverlay.mgh:overlay_threshold=-10,10
Does anybody know the command line to set the overlay color scale to "Color Wheel (Inverse)"?
Thank you!
Any help is very much appreciated!
Best regards,
Anna
------------------------- Anna Gardumi Department of Cognitive Neuroscience | Faculty of Psychology & Neuroscience | Maastricht University Postal address: PO Box 616, 6200MD, Maastricht, The Nederlands Visiting address: Oxfordlaan 55, room 2.012, 6229EV anna.gardumi@maastrichtuniversity.nl