Hi Pooja I'd suggest reading in the mgz volume with MATLAB (you can use the function MRIread in $FREESURFER_HOME/matlab) and export it to your favorite format from there Cheers Eugenio
Sent from my phone, please excuse brevity and typos
________________________________ From: pooja prabhu prabhuppooja@gmail.com Sent: Thursday, March 22, 2018 9:47:52 AM To: freesurfer@nmr.mgh.harvard.edu Subject: Regarding hippocampus tesellation
Hello, This is Pooja. I am trying to segment the hippocampus using the function introduced by Freesurfer i.e -hippocampal-subfields. Segmentation was successful but the final file format is .mgz. Could you please guide me how can i tessellate the hippocampus and cortical surface? i want this surface to place the dipole so please help me. Thank
-- Thank You Pooja Prabhu
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