not sure what is going on there. Can you send the full terminal output? Also can you email me the mri_glmfit-sim file?
On 3/19/17 11:00 PM, June Kang wrote:
The version downloaded in offical page. 6.0 stable for OS X.
On Mar 20, 2017, at 11:02 AM, Douglas Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:
what version of FS are you running?
On 3/18/17 11:41 AM, June Kang wrote:
Dear Freesurfer Developers,
6.0 Stable in OS X seems to have some bugs. Monte-Carlo simulation works fine in 10mm FWMH, but error shows up in 5mm or 0mm as below. ###Error Code### ERROR: CSDread(): could not open /Applications/freesurfer/average/mult-comp-cor/fsaverage/lh/cortex/fwhm4/abs/th13/mc-z.csd ERROR! Error in Monte Carlo simulation: Error running mri_surfcluster! ###Error Code### I found that the actual directory contains cud file is fwhm04, and not fwhm4, so after I copied fwhm04 to fwhm4 in cortex directory, the simulation works. I think it’s small bug, but can make many people (like me) confused. Bests, J.
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