Hi FreeSurfer community,
I would like to run '-bedp' with TRACULA, to run the bedpostx option. I see from the *./subjID/scripts/trac-all.cmd* file that the actual command issued was *bedpostx_seychelles*, which allows for the PBS queueing system running on seychelles and is used by the Martinos Center folks to parallelize computation. I have 2 questions regarding this modification:
1 - Can I switch to strictly *bedpostx*? Is there a text file I can alter to reflect changes to the commands issued? I believe *trac-all.cmd* is actually created at runtime, not prior.
2 - I work at NIH and have the Biowulf cluster to work with. Can I parallelize bedpostx on Biowulf (which uses a Altair's PBS Pro batching system) with TRACULA's *trac-all -bedp* command, or any of *trac-all*?
Thank you for your attention!
Susie Kuo