Hi FreeSurfer experts,
I am repeatedly running into an autorecon3 error (see below). Any ideas how to fix this? It appears that the software is having an issue reading /surf/lh.sphere and immediately exits afterward.
Thank you, Adam
*Adam Mezher*
Staff Research Associate II
Center for Imaging of Neurodegenerative Diseases
San Francisco VA Medical Center
4150 Clement St. (114M)
San Francisco, CA 94121
Tel: 415-221-4810 Ext. 4629
Fax: 415-668-2864
using smoothwm curvature for final alignment $Id: mris_register.c,v 1.59 2011/03/02 00:04:33 nicks Exp $ $Id: mrisurf.c,v 1.693.2.2 2011/04/27 19:21:05 nicks Exp $ reading surface from ../surf/lh.sphere... mris_register: could not read surface file ../surf/lh.sphere ERROR: reading ../surf/lh.sphere Read 0 bytes, expected 1 Linux aldebaran 2.6.18-194.17.4.el5 #1 SMP Mon Oct 25 15:50:53 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s PPMI_290_S_3829m12_i395612 exited with ERRORS at Wed Nov 6 15:57:07 PST 2013