Re: [Freesurfer] preproc-sess - Cannot allocate memory

what is your command line? Also, please send the entire terminal output

On 03/03/2017 01:52 PM, Peled, Noam wrote:

Hey all, I'm running preproc-sess, and getting the following error: ... Reading in mov rest/tmp.bbregister.28405/template.nii Reading in ref .../mri/brainmask.mgz Reading in and applying refmask .../mri/aparc+aseg.mgz Cannot allocate memory

I checked, and the aparc+aseg.mgz file is ok (I can read it with nibabel)

I'm using the FreeSurfer dev version (freesurfer-Linux-centos6_x86_64-dev-20161215-dd925e2) on a 32GB CentOs7 machine, so I don't think I'm really out of memory.

Thanks, Noam

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