External Email - Use Caution
Hello FreeSurfer Developers,
I'm attempting to convert my .nii files (taken from ADNI dataset) to subject files (like bert). For the same I'm following this website : https://secure-web.cisco.com/13_r_7kEeP_WS7SHxH0ECZXOxZuTEltmsSnlVNl81ZLfHEw... I'm getting an error while performing step 4 of 'Running Freesurfer' heading. Command that is giving error : recon-all -all -subjid <subject_id> Here my <subject_id> is subject_0295
Error on the terminal : recon-all -s subject_0295 exited with ERRORS at Tue Dec 8 18:25:40 IST 2020
The freesurfer/subjects/subject_0295/scripts/recon-all.log file didn't mention any specific error.
I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to trouble-shoot this one? Also, I have attached the recon-all.log in case it's of any use.
1) FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v5.3.0 2) Platform: Ubuntu 16.04.7 LTS 3) recon-all.log: see attached