Hi Yan,
mri_convert should be able to convert back and forth, just based on extension.
mri_convert brain.mgz brain.img and
mri_convert brain.img brain.mgz
should both work. Try loading the .img in tkmedit and see if it displays properly
cheers, Bruce
On Wed, 1 Mar 2006, yanxia wrote:
Dear All,
I am a new user of FreeSurfer. I have two questions:
1> Is there a way to convert FreeSurfer surface files to Analyze format? I use 'tkmedit bert brain.mgz lh.pial' to view the image with the surface bounday, and hope that I can save the image and the surface boundary with Analyze format.
2> mri_convert can be use to convert *.mgz file to Analyze file. I use "mri_convert brain.mgz brain.img"> It is empty when I try to open "brain.img" with MRICON software.
Thank you so sume.
Best Regards, Yan
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer