External Email - Use Caution
Hi， I used command: recon-all -s subject1 -i subject1.nii -all -sd /home/t1. I think it is FrreSurfer default method to segementation.
Lejia
At 2024-02-27 01:24:00, "Douglas N. Greve" dgreve@mgh.harvard.edu wrote:
what did you use the do the segmentation? Include command line and terminal output
On 2/26/2024 10:46 AM, lejia2011411409 wrote:
External Email - Use Caution
Dear freesurfer experts,
A large amount of subjects got segmentation white matter bad (some dark white matter cannot be recognition below 57 slices). Attachment show this problem. I used 'kvlEMSegment brainmask.mgz 3 4 4 ' to segment white matter again. while there reported kvlEMSegment: command not found. Do you have any solutions for this? Thanks in advance.
Best wishes, Lejia
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer