Do you know when the next version is slated to launch? That being said, if I wanted to salvage my work so far, is it best to just use the original "subcortical" output as is (if I was not trying to change it in the first place?).
-Mark Fletcher
On Wed, Oct 17, 2012 at 12:01 PM, Bruce Fischl fischl@nmr.mgh.harvard.eduwrote:
Hi Mark
it's hard to say if it's a "bug", but it is definitely a change in behavior that will go away with 5.2 (that is, we will no longer regenerate the aseg when you add control points).
cheers Bruce On Wed, 17 Oct 2012, Mark Fletcher wrote:
Dear FreeSurfers,
After adding WMCP to a number of my subjects (which corrected the
problem),
I retrieved to cortical and subcortical volumes from my subjects using
the
"aparcstats2table". I had used "aparcstats2table" before and after adding the control points. Accurately, the regions I wanted to change, did
change
in volume. However, the subcortical volumes post WMCP changed a lot as well? Some regions changed more than 20% after adding WMCP to other regions? Is this normal? Should I go with the original "subcortical" segmentation volumes, or the new ones? Is this part of the known bug in version 5.1.0 mentioned in the release notes about "running recon-all" a second time? Please advise?
Sincerely , Mark Fletcher
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