I do get /autofs see below [snapjudge:dep_LGI] (nmr-std-env) pwd /autofs/space/barlab_002/users/cibu/dep_LGI
But I changed source directory to /autofs/space/barlab/2/users/cibu/dep_LGI
and as pratap pointed out ?h.lgi does not exist I changed it to ?h.pial_lgi and things are working fine I am a newbie to FS. Many thanks for helping with this Doug, Pratap
- Cibu
On Thu, 2008-09-18 at 11:22 -0400, Doug Greve wrote:
/space/barlab_002/users/cibu/dep_LGI does not exist
Cibu Thomas wrote:
Hello When I run the mri_preproc command I am getting the message ERROR: cannot find fsaverage in /space/barlab_002/users/cibu/dep_LGI But the fsaverage folder is in the path and subjects_dir is set correctly. So I am not sure what's wrong with the command Here's the command I am trying to run
mris_preproc --fsgd lgi_N32_Dep_Ctrl_Age_BDI.fsgd --target fsaverage -- hemi lh --meas lgi --out N32_lgi_dep_ctrl_Age_BDI_lh.mgh
Any help would be greatly appreciated
Thankyou Cibu Thomas
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