Do you mean that the inflated is not somehow in line with the pial? They are not supposed to be (and it is not clear what that would mean). The white and pial look aligned
On 7/6/20 7:16 AM, Mason Wells wrote:
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Hi Experts,
I am using mris_convert to convert native FreeSurfer surf files (inflated, pial and white) to GIFTI files. However, when I view them in Freeview, there seems to be a misalignment/error (attached). The commands I ran followed this structure:
Mris_convert lh.inflated lh.inflated.surf.gii
Any help would be great.
Mason
*Mason T Wells, MSc*
*PhD student*
School of Optometry and Vision Sciences
& Cardiff University Brain Research
Imaging Centre (CUBRIC), School of Psychology
Cardiff University
Cardiff
CF24 4HQ
UK
*/Email/*: WellsMT1@cardiff.ac.uk mailto:WellsMT1@cardiff.ac.uk
*/Tel/*: 02920 879628
*/Web/*: Cardiff University webpage https://www.cardiff.ac.uk/people/research-students/view/974214-
*Mason T Wells, MSc*
*Myfyriwr PhD*
Yr Ysgol Optometreg a Gwyddorau’r Golwg
& Canolfan Ymchwil Delweddu’r Ymennydd Prifysgol Caerdydd (CUBRIC), Yr Ysgol Seicoleg
Prifysgol Caerdydd
Heol Maindy
Caerdydd
CF24 4HQ
DU
*/E-bost/*: WellsMT1@caerdydd.ac.uk mailto:WellsMT1@caerdydd.ac.uk
*/Ffôn/*: 02920 879628
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