Good morning Doug, I can load ?h.white and rh.smoothwm but not lh.smoothwm to freeview. I can even load lh.smoothwm.nofix. So apparently, that is the corrupted file. So, would you tell me how to regenerate the lh.smoothwm without redoing the whole recon?
Thanks ________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Douglas N. Greve dgreve@mgh.harvard.edu Sent: Friday, November 13, 2020 9:58 AM To: freesurfer@nmr.mgh.harvard.edu freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mris_pmake error - freadFloat: fread failed
Can you open the smoothwm with another application? Eg, mris_info or freeview -f
On 11/12/2020 9:52 AM, Nasr, Shahin,Ph.D. wrote: Hi Surfers, For one subject, when I run mris_pmake as below:
mris_pmake --subject <Subject_Name> --hemi lh --surface smoothwm --mpmProg pathFind --mpmArgs vertexStart:<Start Vertex>,vertexEnd:<End Vertex> --mpmOverlay euclidean
I get the following error:
mris_pmake error - freadFloat: fread failed
This error appears irrespective of the Start/End vertex, as far as I see. I guess this error is because a file in the subject's brain recon is corrupted. But unfortunately, the error message is not helpful. I even tried to open the error.log. But I do not see any further info there.
Any suggestions?
Shahin
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