It looks like a very patchy, warped version of the brain. I find that this is true for all subjects (/fsfast-functional/sess???/bold/001/fmcpr.up.sm5.mni305.2mm.nii.gz). I used both freeview and fslview to visualize the images.
On Fri, Sep 21, 2012 at 4:06 PM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:
yes, you would expect that. what does it look like? how are you visualizing it?
On 09/20/2012 06:18 PM, Andrew Bock wrote:
Hello,
I am attempting to run preproc-sess on my functional data, and am following the tutorial found here:
http://surfer.nmr.mgh.harvard.edu/fswiki/FsFastTutorialV5.1/FsFastPreProc
I downloaded the tutorial data, and find that when I view fmcpr.up.sm5.mni305.2mm.nii.gz it looks quite ugly (i.e. does not look like a brain). I would expect this file to look like the fsaverage brain, is that not correct?
Andrew
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