Yes, it was. I tried copy and pasting it and just attaching the log file. Can I paste urls here? I'll just upload it to pastebin or something like that.
On Thu, Jun 6, 2013 at 2:38 PM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:
That's weird, people upload their recon-all.log files all the time. Was the email kicked back to you?
On 06/06/2013 03:27 PM, Erin Browning wrote:
The log file for recon-all is too large. How should I send it?
On Thu, Jun 6, 2013 at 1:48 PM, Douglas N Greve <greve@nmr.mgh.harvard.edu mailto:greve@nmr.mgh.harvard.edu> wrote:
Hi Erin, thanks for reposting. Can you post the recon-all.log file? doug On 06/06/2013 02:37 PM, Erin Browning wrote: > Hi everyone-- > > I emailed the other day about hyperintensity after running motioncor. > We've skipped motioncor in our processing now, but we keep getting > this error while running AR2. > > \n mri_ca_register -invert-and-save transforms/talairach.m3z \n > mri passed volume size is different from the one used to create M3D data > Loading, Inverting, Saving, Exiting ... > Reading transforms/talairach.m3z > gunzip -c transforms/talairach.m3z > Inverting GCAM > ERROR: mri_ca_register with non-zero status 0 > Darwin cerebrum.uwm.edu <http://cerebrum.uwm.edu> <http://cerebrum.uwm.edu> 10.8.0 Darwin Kernel > Version 10.8.0: Tue Jun 7 16:33:36 PDT 2011; > root:xnu-1504.15.3~1/RELEASE_I386 i386 > recon-all -s freesurfer exited with ERRORS at Wed Jun 5 19:32:56 CDT 2013 > > I tried rerunning recon-all -s freesurfer -talairach before running > AR2, and that didn't fix the error. What's going wrong? > > Thanks, > Erin Browning > > > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer -- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu <mailto:greve@nmr.mgh.harvard.edu> Phone Number: 617-724-2358 Fax: 617-726-7422 Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting <http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting> FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html <http://www.nmr.mgh.harvard.edu/facility/filedrop/index.html> Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu <mailto:Freesurfer@nmr.mgh.harvard.edu>
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center greve@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2 www.nmr.mgh.harvard.edu/facility/filedrop/index.html Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer