can you send the full screen output also? On Mon, 22 Feb 2016, Corinna Bauer wrote:
Hi Bruce, I checked and it is indeed a volume file with 256x256x256 size.
The full command line was: mris_make_surfaces -cover_seg edited_ribbon.mgz subject_id lh
Thanks
Corinna
On Sat, Feb 20, 2016 at 1:38 PM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote: Hi Corinna
can you send us your full command line? Sounds like you are using a surface overlay as the cover_seg parameter instead of a volume one. Try running mri_info on it to make sure it is a volume (i.e. 256x256x256). If not, you will need to sample it into the volume with mri_surf2vol thanks Bruce On Thu, 18 Feb 2016, Corinna Bauer wrote: > Hello all, > I am attempting to reshape the pial surfaces to fill the new boundaries in > my edited ribbon.mgz file. I am using mris_make_surfaces with the -cover_seg > flag but keep getting this error: > ERROR: mris_make_surfaces-MRIcheckVolDims: volume1 height=256 != volume2 > height=1. > > Any suggestions? > > Thanks! > Corinna > > FYI: I am trying to reshape the pial boundary based off this previous > thread. > https://mail.nmr.mgh.harvard.edu/pipermail///freesurfer/2014-November/04134 > 8.html > >
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