28 Jan
2010
28 Jan
'10
10:27 a.m.
Hello,
I encountered a problem with the command recon-all -s jan -autorecon-all which is supposed to be for all the steps. A full reconstruction. INFO: set hdr.hist.orient to -1 ERROR: failure writing /usr/local/freesurfer/subjects/jan/mri/tmp-mri_motion_correct.fsl-5574/cor-2.img
So I tried flipping the axis- X, Y, Z then, XY, XZ, and finally YZ...which is the format it converted into for it's .mgz file. It still says the same thing.
Next I tried recon1 (from step 1 to 5). It doesn't recognise the command. Command not found, or unrecognised.
Please tell me what I can try to make this work.
Thank you. Jan