Hi Paolo, I think you'll find this tutorial has what you are looking for: https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Diffusion#ResamplingStr... Allison
On Tue, 10 Jan 2012, paolo wrote:
Hi, i have a problem:
i have a file aseg+aparc.mgz, generated by freesurfer, and i would like to visualize it with trackvis (i mostly need the aparc part). the problem is, that if i just convert it to nifti, it seems to be in a different reference frame.
i tried to read the freesurfer coordinate tutorial, but i couldnt figure out what's the right way to convert a freesurfer mgz into trackvis coordinate space..
does anyone have a clue?
thanks, Paolo _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer