per the FreeSurferColorLUT.txt file, label 10 is Left-Thalamus-Proper, ie, the first column is the label number.

On Fri, 2009-05-15 at 17:32 -0300, Paula Diniz wrote:

Thanks Bruce!

But the problem is in the values of minc file. For exemplo the which structure is in the label 10 in minc file? The FreeSurferColorLUT.txt has a RGB values and I don't Know which the RGB coordenates in the minc file converted. Do you understand me?

Thanks!

2009/5/15 Bruce Fischl fischl@nmr.mgh.harvard.edu it's in $FREESURFER_HOME/FreeSurferColorLUT.txt (attached also)

    cheers,
    Bruce

    On Fri, 15 May 2009, Paula Diniz wrote:

            Hello!

            I have to convert the aseg.mgz file to a minc file,
            but I lost the structure
            values reference.
            Where I can find a convertion table or how I make to
            recover the structures
            values reference?

            Thanks!

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Paula Rejane Beserra Diniz Bacharel em Informática Biomédica Mestre em Neurociências Doutoranda em Neurociências Universidade de São Paulo Hospital das Clínicas - Ribeirão Preto ================================== _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer