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Hi Douglas,
Previously, after I ran recon-all, I would get multiple labels for the same brain area. For example, for BA3b, I have BA3b.label, BA3b.hmap.label and BA3b.thresh.label for each hemisphere.
However this time I only have BA3b_exvivo.label, I wonder how would I get other labels, which command should I run?
Many Thanks
PL
On Wed, 24 Jun 2020 at 16:09, Douglas N. Greve dgreve@mgh.harvard.edu wrote:
I'm not sure what you mean by "like lh.BA3b.label". Are you just talking about the file name or the actual label?
On 6/24/2020 7:37 AM, Peng Liu wrote:
External Email - Use CautionDear Freesurfer experts,
I was trying to perform some ROI analysis with results obtained from recon-all. However I noticed that after recon-all, the labels created were like 'lh.BA3b*_exvivo*.label', whereas the labels I would want to create are like 'lh.BA3b.label'.
I have tried mri_annotation2label command, but the results I got were not as wanted either.
Does anyone know how to create labels like 'lh.BA3b.label'?
Any help would be appreciated a lot!
Many Thanks
PL
[image: Otto-von-Guericke University Magdeburg]
Peng Liu, PhD Candidate
Institut für Kognitive Neurologie und Demenzforschung (IKND) Otto-von-Guericke Universität Magdeburg Deutsches Zentrum für Neurodegenerative Erkrankungen e.V. (DZNE)
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Email: peng.liu@med.ovgu.de/Peng.Liu@dzne.de Phone: +49 391 67 25074
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