28 Mar
2017
28 Mar
'17
4:05 p.m.
Don't use those IDs. Just run it with a single ID (eg, 17). The ouput file will then have a bunch of other columns called CortexVol, SubCortGray, CerebralWhiteMatter, etc
On 03/28/2017 04:01 PM, shi yao wang wrote:
Dear FS experts: How can I get the whole cerebral WM and cortex volume.
I am using following command:
asegstats2table --subjects 10001 --segno 2 3 41 42 24 --tablefile 10001_WB_table It shows that no 2,3, 41,42 segment NO, however, they can be found in the FreeSurferColorLUT.txt file. thanks Lawrence
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
greve@nmr.mgh.harvard.edu
Phone Number: 617-724-2358
Fax: 617-726-7422
Bugs: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
FileDrop: https://gate.nmr.mgh.harvard.edu/filedrop2
www.nmr.mgh.harvard.edu/facility/filedrop/index.html
Outgoing: ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/