Hi, is this true for FSFAST vs. 5.1 as well? -Tapsya
You will need the AFNI 3dvolreg command. This is the only AFNI command you'll need, but you may need to download and install AFNI to get it.
doug
Eiran Vadim Harel wrote:
Hi, I am using stable5.0-env. I have run the pre[processing command:
preproc-sess -s 1411_MC -surface fsaverage lhrh -mni305 -fwhm 5 -per-run
I got this ERROR message:
/autofs/space/shimshon_002/users/eiran/contproc/1411_MC RunList: 005 006 007 ------- ************************** ----------- ------- Motion Correcting Run 005 ----------- ------- ************************** ----------- sess = 1411_MC Fri Aug 5 11:51:17 EDT 2011 mc-afni2 --i 005/f.nii --t 005/template.nii --o 005/fmcpr.nii --mcdat 005/fmcpr.mcdat ERROR: cannot find AFNI command 3dvolreg
My PROJECT DIR: /space/shimshon/2/users/eiran/contproc SUBJECTS_DIR: /space/shimshon/2/users/eiran/subjects
Is there a way to solve it? Thanks, Eiran _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
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