You shouldn't ever add any that are not in white matter. Feel free to upload the subject and we will take a look
On Apr 18, 2011, at 7:35 PM, andrewmains12@berkeley.edu wrote:
Hi all,
I have several subjects whose cortical grey matter continues to not be included in the pial surface even after adding numerous control points to the white matter as suggested in https://mail.nmr.mgh.harvard.edu/pipermail/freesurfer/2007-July/005649.html . Some of the control points I added were outside of the pial surface boundary--does this cause them to be ignored? I have white matter areas with multiple control points that are still not included in either the pial or white matter boundaries.
I can supply images if it would be helpful.
Thanks for any help!
Andrew
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