Hi Chester
This is now fixed in the newest dev release. The osx gcc libraries required by the matlab binaries weren’t being distributed correctly. Sorry for the inconvenience
best Andrew
From: freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Chester Kang ckkang@unimelb.edu.au Reply-To: FS Help freesurfer@nmr.mgh.harvard.edu Date: Sunday, March 29, 2020 at 6:54 PM To: FS Help freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] segmentThalamicNuclei.sh - Undefined symbol error, Invalid MEX file
External Email - Use Caution Hi,
We are wanting to run the hippocampal subfields which is part of the developmental version of FreeSurfer ("freesurfer-darwin-macOS-dev.pkg").
The FreeSurfer v7.0.0 Dev and the Matlab2014b (Run Time Version) has also been installed.
But are getting errors. E.g., "... Invalid MEX-file '/tmp/MCR_488630323/.mcrCache8.4/Segmen0/autofs/space/panamint_005/users/ig lesias/software/freesurfer.GEMS2.MAC/bin/kvlGEMSMatlab.mexmaci64' ..."
It looks like a similar problem existed in 2018 (though I cannot find a fix). https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg56815.html
Any help would be greatly appreciated. Thanks in advance!
Regards, Chester