Re: [Freesurfer] Extracting anatomical locations for a set of RAS coordinates

First, you'll have to find the closest vertex for each point in fsavarage. You can do this with by creating a label file then using mri_label2label with the --paint option.

To find the label associated with each vertex, it is  probably easiest to use matlab using read_surf.m and read_annotation.m

On 2/5/19 11:17 AM, Sparsh Jain wrote:

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Good afternoon

Is there is way to automatically extract the anatomical locations corresponding to a set of RAS coordinates using Freesurfer's atlas? I have a set of 200 points and I am trying to get their anatomical labels automatically.

Thank you Sparsh

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