Hi Bruce My command line is cd $SUBJECTS_DIR/subjid/surf mri_surf2surf \ --s con_52 \ #It is my Processed freesurfer date --trgsubject fsaverage \ --hemi lh \ --sval lh.thickness \ --tval lh.thickness.fsaverage.mgh \ --reshape #or reshape-factor 7 Zhu
-----Original E-mail----- From: "Bruce Fischl" fischl@nmr.mgh.harvard.edu Sent Time: 2012-9-6 20:15:35 To: zzy7758@mail.ustc.edu.cn Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mri_surf2surf error
Hi Zhu
what is your command line?
Bruce
On Thu, 6 Sep 2012, zzy7758@mail.ustc.edu.cn wrote:
Hi Freesurfers,
I'm trying to extracting thickness value for a ROI which is created by afni.I follow the workflows of "Cortical Thickness of a Volume-defined ROI". The ROI mask and T1 volume file are all talairach transformed. When I map the thickness data to the fsaverage subject with mri_surf2surf,an error occured: "dimension inconsistency in source data Number of surface vertices =154984 Number of value vertices =163842"(23406*1*7) So I use reshape-factor 7 flag ,but it does not work, how can I fix this? Any advise would be appreciated!
best Zhu
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