7 Oct
2013
7 Oct
'13
3:12 a.m.
Dear Douglas and Martin,
Thanks for your replies.
So far I have always been able to get eTIV when running asegstats2table (last column on the spreadsheet). But my current FreeSurfer version (5.3.0) is not grabbing it.
I can found eTIV in the header and extract it for all the subjects with mri_segstats (as below in blue), but output is quite messy. I would rather prefer to get it as in asegstats2table format.
Any idea?
Thanks a lot,
Dani
for i in FAD*; do echo $i; mri_segstats --subject $i --etiv-only >> table_eTIV; done