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Thanks, Andrew for replying.

Best regards Xin

On Thu, Aug 12, 2021 at 10:52 AM Hoopes, Andrew AHOOPES@mgh.harvard.edu wrote:

Hi Xin,

Are you using the QA tools from https://secure-web.cisco.com/1M0BdrfUAFtsM7sCclEujxPoDhQ5T-YCM-ykHvPvQIzmG_t... Those are specific to FS 5.3 (we should update the wiki). v7.1 includes an executable named `qatools.py` that functions similarly.

best

Andrew

*From: *freesurfer-bounces@nmr.mgh.harvard.edu < freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Xin Qi < xinqi2000@gmail.com> *Date: *Thursday, August 12, 2021 at 12:00 AM *To: *Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Subject: *[Freesurfer] about FreeSurfer QA tools errors

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Hi Freesurfer Community Support Team:

We would like to use FreeSurfer QA tools.

After installing it, I tested it on one subject that finished Freesurfer recon-all processing using the latest FreeSurfer 7.1. but got errors that seem many files are missing in the mri, surf, stat folders created by FreeSurfer.

I attach the recon_checker summary log and zipped snaps file for your reference.

Looking forward to hearing from you. Thank you very much.

Best regards

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