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Hi Thank you for your help. I ran SynthSeg successfully. How do you derive sbTIV value ? Could one use sbTIV from SAMSEG?
Many thanks AJ
Sorry, what is the “sb” in sbTIV? I’m sure you can use it from samseg, or just use samseg for the segmentation as well if you want, since it is agnostic with respect to MRI sequence as well. Cheers Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of AJ Sent: Saturday, November 27, 2021 10:03 AM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] SynthSeg
External Email - Use Caution Hi Thank you for your help. I ran SynthSeg successfully. How do you derive sbTIV value ? Could one use sbTIV from SAMSEG?
Many thanks AJ
External Email - Use Caution
Many thanks. Best AJ
On Sat, Nov 27, 2021, 20:04 Fischl, Bruce BFISCHL@mgh.harvard.edu wrote:
Sorry, what is the “sb” in sbTIV? I’m sure you can use it from samseg, or just use samseg for the segmentation as well if you want, since it is agnostic with respect to MRI sequence as well.
Cheers
Bruce
*From:* freesurfer-bounces@nmr.mgh.harvard.edu < freesurfer-bounces@nmr.mgh.harvard.edu> *On Behalf Of *AJ *Sent:* Saturday, November 27, 2021 10:03 AM *To:* Freesurfer support list freesurfer@nmr.mgh.harvard.edu *Subject:* [Freesurfer] SynthSeg
External Email - Use Caution *Hi
Thank you for your help. I ran SynthSeg successfully. How do you derive sbTIV value ? Could one use sbTIV from SAMSEG?
Many thanks
AJ _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://secure-web.cisco.com/1Ws3zQ6wnXfNadt9vGc9CjEFvs_j-TIAjUpFWMpS_fysQST... The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Mass General Brigham Compliance HelpLine at http://secure-web.cisco.com/1waTjzo22JFp4zAN4d-MThev-WCGCpt_cuXZgBW5a8Z89hg9... . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail. Please note that this e-mail is not secure (encrypted). If you do not wish to continue communication over unencrypted e-mail, please notify the sender of this message immediately. Continuing to send or respond to e-mail after receiving this message means you understand and accept this risk and wish to continue to communicate over unencrypted e-mail.
Sure. I should add that because the method is sequence agnostic doesn’t mean the results won’t be biased by differences in contrast in the input sequence.
Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu On Behalf Of AJ Sent: Saturday, November 27, 2021 11:03 PM To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] SynthSeg
External Email - Use Caution Many thanks. Best AJ
On Sat, Nov 27, 2021, 20:04 Fischl, Bruce <BFISCHL@mgh.harvard.edumailto:BFISCHL@mgh.harvard.edu> wrote: Sorry, what is the “sb” in sbTIV? I’m sure you can use it from samseg, or just use samseg for the segmentation as well if you want, since it is agnostic with respect to MRI sequence as well. Cheers Bruce
From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of AJ Sent: Saturday, November 27, 2021 10:03 AM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] SynthSeg
External Email - Use Caution Hi Thank you for your help. I ran SynthSeg successfully. How do you derive sbTIV value ? Could one use sbTIV from SAMSEG?
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freesurfer@nmr.mgh.harvard.edu
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Fischl, Bruce