The Volumes module in 3D slicer (v3) will load mgz files. You can use the Model Maker module to create models of your structures using the FreeSurfer label codes.

http://www.slicer.org/

_________________________ Jeffrey J. Dewey Center for Neurological Imaging Brigham and Women's Hospital 1249 Boylston St, 3rd Floor Boston, MA 02215 jdewey@bwh.harvard.edu

On Mar 17, 2009, at 3:26 PM, Alexa Nardelli wrote:

Hi,

I have used FreeSurfer volumetrics to obtain various volumes of some subcortical structures. I would like to obtain a 3D image of each of these subcortical structures. I have tried importing the volumes into Matlab, however Matlab doesn't recognize the mgz file. Any suggestions on how I could go about doing this?

Thanks,

Alexa _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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