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ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/dev

Sent from my phone, please excuse brevity and typos

________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of Miguel Ángel Rivas Fernández miguelrivasfdez@gmail.com Sent: Tuesday, September 11, 2018 5:59:48 PM To: Freesurfer support list Subject: Re: [Freesurfer] Amygdala subfields segmentation

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Hi Eugenio,

Where can I find the link for download the latest dev version?

The latest version is this?:

freesurfer-darwin-OSX-ElCapitan-dev.tar.gz

Thanks in advance,

Best,

El mar., 11 sept. 2018 a las 17:47, Iglesias Gonzalez, Eugenio (<e.iglesias@ucl.ac.ukmailto:e.iglesias@ucl.ac.uk>) escribió:

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Dear MA Please download the latest dev version and the command will be there Cheers Eugenio

Sent from my phone, please excuse brevity and typos

________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Miguel Ángel Rivas Fernández <miguelrivasfdez@gmail.commailto:miguelrivasfdez@gmail.com> Sent: Tuesday, September 11, 2018 12:20:55 PM To: Freesurfer support list Subject: [Freesurfer] Amygdala subfields segmentation

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Hi Freesurfer developes,

I am trying to execute the hippocampal and amygdala segmentation command " segmentHA_T2.sh bert FILE_ADDITIONAL_SCAN ANALYSIS_ID USE_T1 [SUBJECTS_DIR]" but freesurfer gave to me this error command not found.

However, when I use the command that segment only the hippocampal subfields (recon-all -s <subject_name> -hippocampal-subfields-T2 <file name of additional scan> <analysisID>) I don´t have any problem.

What would be the reason?

Thanks in advance.

Best,

-- Miguel Ángel Rivas Fernández _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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-- Miguel Ángel Rivas Fernández