3 Dec
2011
3 Dec
'11
1:34 p.m.
Hi,
I am using freesurfer to process subjects with WM lesions. My data is axial and my lesion masks are in this space. I wanted to use the lesion mask to correct wm.mgz to improve the cortical surfaces. to perform this I tried to use
mri_convert lesion.mgz lesion_FS_spance.mgz --conform
It takes the lesion mask to the desired space, however it used linear interpolation, I need nearest neighbor interpolation. I could not find a flag for specifying the interpolation type in mri_convert. Would you please help me with this?
Thanks,
--
Navid Shiee
Ph.D. Candidate
Laboratory of MEDical Image Computing (MEDIC)
Image Analysis and Communication Laboratory (IACL)
Johns Hopkins University